Uses of Class
ProGAL.proteins.structure.CBond

Packages that use CBond
ProGAL.proteins.structure   
ProGAL.proteins.structure.generators   
 

Uses of CBond in ProGAL.proteins.structure
 

Methods in ProGAL.proteins.structure that return CBond
 CBond[] Atom.covalentBonds()
           
 CBond[] AminoAcidChain.covalentBonds()
           
 

Methods in ProGAL.proteins.structure with parameters of type CBond
 void Atom.setCovalentBonds(CBond[] bonds)
           
 

Uses of CBond in ProGAL.proteins.structure.generators
 

Methods in ProGAL.proteins.structure.generators that return CBond
 CBond[] HeavyAtomAminoAcidGenerator.generateBonds(AminoAcid[] aminoAcids)
           
 CBond[] CABAminoAcidGenerator.generateBonds(AminoAcid[] aminoAcids)
           
 CBond[] AtomGenerator.generateBonds(AminoAcid[] aminoAcids)
           
 CBond[] AllAtomAminoAcidGenerator.generateBonds(AminoAcid[] aminoAcids)