Uses of Class
ProGAL.geomNd.Point

Packages that use Point

ProGAL.dataStructures.rangeSearching
ProGAL.dataStructures.rangeSearching.rangeTree
ProGAL.geom2d	This package contains classes that are all related to two-dimensional geometric concepts.
ProGAL.geom3d	This package contains classes that are all related to three-dimensional geometric concepts.
ProGAL.geom3d.complex	A simplicial complex is a topological space of a particular kind, constructed by "gluing together" points, line segments, triangles, and their n-dimensional counterparts.
ProGAL.geomNd	This package contains classes that are all related to Euclidean geometric concepts of dimension larger than three.
ProGAL.geomNd.complex
ProGAL.geomNd.complex.delaunayComplex
ProGAL.math	This package contains math-classes that are not necessarily related to geometrical concepts.
ProGAL.proteins.structure

Uses of Point in ProGAL.dataStructures.rangeSearching

Methods in ProGAL.dataStructures.rangeSearching that return types with arguments of type Point

java.util.List<Point>	RangeSearchDataStructure.query(Point low, Point high)
java.util.List<Point>	LinearRangeSearch.query(Point low, Point high)
java.util.List<Point>	GridMap.query(Point low, Point high)

Methods in ProGAL.dataStructures.rangeSearching with parameters of type Point

void	LinearRangeSearch.addPoint(Point p)
void	GridMap.addPoint(Point p)
int[]	GridMap.cellFromPoint(Point p)
java.util.List<Point>	RangeSearchDataStructure.query(Point low, Point high)
java.util.List<Point>	LinearRangeSearch.query(Point low, Point high)
java.util.List<Point>	GridMap.query(Point low, Point high)

Constructor parameters in ProGAL.dataStructures.rangeSearching with type arguments of type Point

GridMap(double cellSize, java.util.List<Point> points)

Uses of Point in ProGAL.dataStructures.rangeSearching.rangeTree

Fields in ProGAL.dataStructures.rangeSearching.rangeTree declared as Point

Point

RangeTreeAssocValue.point

Methods in ProGAL.dataStructures.rangeSearching.rangeTree that return types with arguments of type Point

java.util.List<Point>	RangeTreeNodeNd.query(double[] low, double[] high) Return the points inside the given range.
java.util.List<Point>	RangeTreeNode2d.query(double[] low, double[] high) Return the points inside the given range.
java.util.List<Point>	RangeTreeNode1d.query(double[] low, double[] high)
abstract java.util.List<Point>	RangeTreeNode.query(double[] low, double[] high) Return the points inside the given range.
java.util.List<Point>	RangeTree.query(double[] low, double[] high) Query the range tree given a low and a high value for each dimension.
java.util.List<Point>	RangeTree.query(Point p1, Point p2) Query the range given two points.

Methods in ProGAL.dataStructures.rangeSearching.rangeTree with parameters of type Point

int	PointDimensionComparator.compare(Point p1, Point p2)
java.util.List<Point>	RangeTree.query(Point p1, Point p2) Query the range given two points.

Constructors in ProGAL.dataStructures.rangeSearching.rangeTree with parameters of type Point

RangeTreeAssocValue(Point point, int leftindex, int rightindex)
Instanciates an value object in a associated structure.

Constructor parameters in ProGAL.dataStructures.rangeSearching.rangeTree with type arguments of type Point

RangeTree(java.util.List<Point> points)
Initialize the range tree by presorting according to each dimension.

RangeTreeNode1d(java.util.List<java.util.List<Point>> sortedpoints)

RangeTreeNode2d(java.util.List<java.util.List<Point>> sortedpoints, int dimension)
Initialize the RangeTreeNode for 2 dimensions.

RangeTreeNodeNd(java.util.List<java.util.List<Point>> sortedpoints, int dimension)
Initialize the RangeTreeNode for N dimensions.

Uses of Point in ProGAL.geom2d

Subclasses of Point in ProGAL.geom2d

class	Point A point in (x,y)-space represented using double precision.
class	TriangulationVertex

Uses of Point in ProGAL.geom3d

Subclasses of Point in ProGAL.geom3d

class

PointWeighted

Uses of Point in ProGAL.geom3d.complex

Subclasses of Point in ProGAL.geom3d.complex

class

CVertex

Uses of Point in ProGAL.geomNd

Methods in ProGAL.geomNd that return Point

Point	Point.addThis(Vector v) Add the specified vector to this point.
Point	Point.clone()
Point	HyperSphere.getCenter()
Point	PointList.getCentroid() Get the centroid of the points.
static Point	Point.getMidpoint(Point p, Point q) Creates the midpoint of two points.
Point	Point.multiplyThis(double s) Scale this point by the specified value
Point	Point.set(Point p) Set the coordinates to be identical to those in the specified point.
Point	Point.setCoord(Point p) Set the coordinates to be identical to those in the specified point.
Point	Vector.toPoint() Convert this vector to a point.

Methods in ProGAL.geomNd that return types with arguments of type Point

static java.util.List<Point>

PointList.generatePointsInCube(int n, int d)

Methods in ProGAL.geomNd with parameters of type Point

boolean	PointList.add(Point p)
static boolean	Point.collinear(Point p1, Point p2, Point p3)
double	Point.distance(Point p) Returns distance to the point p
double	Point.distanceSquared(Point p) Returns squared distance to the point p
double	Point.dot(Point p)
static double	Point.getAngle(Point p1, Point p2, Point p3)
static Point	Point.getMidpoint(Point p, Point q) Creates the midpoint of two points.
Point	Point.set(Point p) Set the coordinates to be identical to those in the specified point.
void	HyperSphere.setCenter(Point p)
Point	Point.setCoord(Point p) Set the coordinates to be identical to those in the specified point.
Vector	Point.vectorTo(Point p1)

Constructors in ProGAL.geomNd with parameters of type Point

HyperSphere(Point center, double radius)

Point(Point p)

PointList(Point[] elements)
Construc a point-list from an array of points.

Vector(Point p)
Construct a vector pointing from origo to p.

Vector(Point p1, Point p2)
Constructs a vector between two points p1 and p2 - added by pawel 12-11-2011

Uses of Point in ProGAL.geomNd.complex

Subclasses of Point in ProGAL.geomNd.complex

class

Vertex

Methods in ProGAL.geomNd.complex that return Point

Point

Tessel.getPoint(int i)

Constructors in ProGAL.geomNd.complex with parameters of type Point

Vertex(Point p)

Vertex(Point p, boolean bigpoint)

Uses of Point in ProGAL.geomNd.complex.delaunayComplex

Methods in ProGAL.geomNd.complex.delaunayComplex with parameters of type Point

static boolean

BowyerWatson.inSphere(Tessel t, Point p) Return true if and only if the point p is inside or on the boundary of the circumsphere of t

Method parameters in ProGAL.geomNd.complex.delaunayComplex with type arguments of type Point

static java.util.List<Tessel>	BowyerWatson.createAndDrawDelaunay(java.util.List<Point> points) Convenient static method for creating delaunay tessellation of a point-set and if its 2D or 3D also displaying it.
static java.util.List<Tessel>	BowyerWatson.createDelaunay(java.util.List<Point> points) Convenient static method for creating delaunay tessellation of a point-set

Constructor parameters in ProGAL.geomNd.complex.delaunayComplex with type arguments of type Point

BowyerWatson(java.util.List<Point> points)
Builds the Delaunay complex of the specified point-set using Bowyer-Watson algorithm

Uses of Point in ProGAL.math

Methods in ProGAL.math that return Point

Point	Matrix.multiply(Point p) Apply this matrix to the point p and return the result (this will NOT change p).
Point	Matrix.multiplyIn(Point p) Apply this matrix to the point p and return the result (this will change p).

Methods in ProGAL.math with parameters of type Point

Point	Matrix.multiply(Point p) Apply this matrix to the point p and return the result (this will NOT change p).
Point	Matrix.multiplyIn(Point p) Apply this matrix to the point p and return the result (this will change p).

Uses of Point in ProGAL.proteins.structure

Subclasses of Point in ProGAL.proteins.structure

class

Atom A class to represent the following properties of an atom: Position Van der waals radius covalent bonds name an id unique to this atom among all the atoms within the same amino acid a pointer to the residue that the atom belongs to The position is maintained in the super-class Point.